CDS
| Accession Number | TCMCG037C15879 |
| gbkey | CDS |
| Protein Id | XP_022145049.1 |
| Location | join(1166555..1166915,1167180..1167339,1167439..1167568,1169352..1169426,1173670..1173859,1174934..1175132,1175227..1175314,1175483..1175623,1176465..1176539,1176641..1176712,1177980..1178086,1178744..1178892,1178978..1179200,1179610..1179835,1180232..1180377,1180567..1180732,1181717..1181855,1181938..1182101,1182217..1182453) |
| Gene | LOC111014566 |
| GeneID | 111014566 |
| Organism | Momordica charantia |
Protein
| Length | 1015aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA397875 |
| db_source | XM_022289357.1 |
| Definition | probable RNA-dependent RNA polymerase 5 isoform X1 [Momordica charantia] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11699
[VIEW IN KEGG] |
| EC |
2.7.7.48
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGCCGATCAATTTCAGGAAGTTCCTCTTCCACCGTCCGTTGAGCAGTTGCTTCTTGAAATATGTATGCAACAGAACCAGCCACCGCCTGATGCCAAAGTGCGACTGGCGTTAGCTTCATTGGGTGAAGAAGCAGCTCTTGATACTCTCCACAAAATCTCCTCACGCGCTGTTAGGAGCCTTGGCGGGTTCATCCTGCATATGGTTCGTAATGATCCTTGTACTCCTCAGAAGAAGATGGTTTGGGTTTCTCCGCACCAGAGTCCTTCCTCTTCCGGCGTTTCTCCGTTTCAAAGTCCTTCGACTTGCTCCGTTTCTCCGCATCAAAGTCCTTCAACTTGCCGCGTTTATAGCCCTCAAGGGTTAGGGACTACTGAGAGAACAAGCTTTCAGCCGCCGACTCTAGAAAAATCCGGAAGTTTTTCGTCTTCGGTTTCAGATAGAGCAAACATTCCACAATTTGTGGCGCTGGGAGAACTCGAGTTCAGAAAAGCGTTTCTTATATTGAGTTACATTGGAGGAGAAAGTCTTGAAATGGTCGCAACAGCAGACCAAATTCGAAGTCTGAGCCAGTTACCGATGGAAAAGTTCGAGCTTGAAGTTTGGAAAACATTTGGTGAAAAATGTGTTAGTAAGGAAGACCGCCGAGTGAATGTTGATTGGGATCGTAGGAAAACACACATCTATCACTGTTATGTTGCATTAGATGGGAGTTACAAGTTCAAGGGCCCATTTTTGAACAATACAAAAACTCATCTGCAAAGGGTGTTAGGCGATGACAATGTTTTGATGGTCAAGTTTGCAAAAGACACATCTGATAGATGTTCAACAAACCATCTTGGTGGTTCCTTTTATGCTTATAACAAGATCGCTAGAGATGGAATCCTTCTTGGATTGCGTCAGTATTGTTTTTTTGTTTTCAAAGATGGTGGCAAGGAGGAAAAAAAGAAGAATCCAACCGCATCAGCAGTGAAGTGTTACTTTGTCCGAATGGAGTCAGATGCATATCTTGATAAGATTAGACCTTATAAATTATCAAATAAAACTCTTTTTGAAGCTAGGAGTCTTTTCATGCATGCACATATGGTGTCTAGTGTAGCAAGCTACATGGCTAGGTTTTCACTCATTCTGTCAAAGAGCATAAACCTCAAAATTGATTTATCTACAGTTAATGTTCAAAGAATTGGGGATATACCGTGCAAAGATGTCTATGGTAATGTCATCTATAGAGATGGAAAACCTCTTATACATACAGATGGAACAGGATTTATATCGGAGGACTTGGCTTTGGAGTGCCCTATGAATGTATTTAAAGGGCAGGCAAAGCATGATACCAACCTTAAGAGATTTTCCGCCTTTGAAGAGTTCCAGAATAAGACTTTACAACTGACACTGCCAGGACTTGAACTGCGGGAACCACCCTTGCTAATTCAGTTCCGACTTTTTTACAACGGTCGTGCTGTTAAAGGAACATTTCTAATTAATAAACAGCTTCCTTCTAGAACAATTCAAATCCGCAATTCTATGATTAAAGTTGAAATAGATCCAAATCTTGAAAATGCCAAAACAGAGAATTCAATGGAGGTAGTAGGGACCAGTAATCATCCAAAGAAGACATTTCTTTCAAGAAACTTAATAGCACTTCTGAACTATGGAGGTGTCCCAAGAGAGTATTTCATGAATATCCTTGTGGATGCTTTGAGCGATGTTCAGGGTGTTTTCTCTAGTAAGCGTGCAGCTTTAAGAGTTTCCATTAACAACGGCGATTTGGATGACTTCCTAGTTGCAAGAATGATTTTATCTGGAATTCCTCTTGATGAATCATATTTGCAATATCGATTGTCTATGCTGCTGAGGGAGGAGAAAAAGAGCTTGAAAAGTGGAAGGCTTCACGTGCCTGGATGTTATTATTTAATGGGGACAGCTGATCCTACCTGTACTCTTGAAAGCGATGAAGTCTGTGTTATCCTTGAGAATGGACAAATCAACGGGAAGGTTCTTGTTTATCGCAATCCTGGACTACATTTTGGTGATATCCATGTTTTAACGGCTAAATATGTGGAGGAATTGGTACCTGTAGTGGGAAATGCAAAATATGCTATATTCTTCTCTTGCAAGGGTCCCCGTTCCGTGGCTGATGAAATAGCTGGTGGTGATTTTGATGGTGATATGTACTGGGTTTCGAGAAATTCTCAATTGTTAGAGTATTTCAGACCAGGTGAACCTTGGAGGCCAAGTCCTTCAATGGAAGGAATAACTAATAAAAAGCCAAATGAATTTTCTGCTGAGGACCTAGAGGATGAGCTATTTAAATTATTCTTGACAACTAGGTTTCAGCCGAGTTATGCTAAGAGTGTTGCAGCTGACAACTGGCTGGCTTTAATGGATCAATTACTAATGCTGGGTGAAGATCGTAAAGAAGAAAGAAATCGTGTAAGGGCAAAGATTCTCCAGTTGATCAATATATATTATGATGCTTTAGATGCACCTAAAAAAGGCGGGAAAAAGATAGAAGTTCCAAAACACCTAAAGGCGGGAACTTTGCCACATTTCATGGAAAGGGGAAAAAATTCATATACATCAACTTCAATTCTTGGACAAATTTTTGATACCGTTAACATGTATCAAGAAGAAGTGCCAAACATTGAGGTTCAGAAACTTCCTTGCTTTGAAGATCAAGTGCCGGATGATATCTTGATGAAGTGGAAGTTCCACTATGAGATGTACCGAGCCGAGATGAAAGATGCCATGCAGCTTGATCCTGATGCCAAAAACGTAGCCGCTGAAGCAACCATTAAAAAGTACAAGGAGATATTATATGGTGCCGAAGAGCTCGAGGGTAGCCCGAGATGGTTGGAGGAAGTATGCAAGGAAGCTCTTGCAATTTATCACGTCACATATGACCATGCCATGAGCCATGGCAGTGTGCGCTATTGCAGCTTTGCGTGGAGAGTTGCAGGTTCCGCTCTCTTCAAGCTCTGTGCCAGAAAACAATCCGAAAGGAGCTTTCTTTGTCTCCCTTCAGTTATGCGTGAGATTTTTGGTTAA |
| Protein: MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRSLGGFILHMVRNDPCTPQKKMVWVSPHQSPSSSGVSPFQSPSTCSVSPHQSPSTCRVYSPQGLGTTERTSFQPPTLEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEMVATADQIRSLSQLPMEKFELEVWKTFGEKCVSKEDRRVNVDWDRRKTHIYHCYVALDGSYKFKGPFLNNTKTHLQRVLGDDNVLMVKFAKDTSDRCSTNHLGGSFYAYNKIARDGILLGLRQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMHAHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPCKDVYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDTNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQFRLFYNGRAVKGTFLINKQLPSRTIQIRNSMIKVEIDPNLENAKTENSMEVVGTSNHPKKTFLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMILSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYAIFFSCKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQPSYAKSVAADNWLALMDQLLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDDILMKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEALAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQSERSFLCLPSVMREIFG |